منابع مشابه
mzML2ISA & nmrML2ISA: generating enriched ISA-Tab metadata files from metabolomics XML data
Summary Submission to the MetaboLights repository for metabolomics data currently places the burden of reporting instrument and acquisition parameters in ISA-Tab format on users, who have to do it manually, a process that is time consuming and prone to user input error. Since the large majority of these parameters are embedded in instrument raw data files, an opportunity exists to capture this ...
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Data curation presents a challenge to all scientific disciplines to ensure public availability and reproducibility of experimental data. Standards for data preservation and exchange are central to addressing this challenge: the Investigation-Study-Assay Tabular (ISA-Tab) project has developed a widely used template for such standards in biological research. This paper describes the application ...
متن کاملA Practical Python API for Querying AFLOWLIB
Conrad W. Rosenbrock Department of Physics and Astronomy, Brigham Young University, Provo, Utah 84602, USA. (Dated: October 3, 2017) Abstract Large databases such as aflowlib.org provide valuable data sources for discovering material trends through machine learning. Although a REST API and query language are available, there is a learning curve associated with the AFLUX language that acts as a ...
متن کاملPyRovio: Python API for WowWee Rovio
PyRovio is our Python implementation of the WowWee Rovio API. It allows direct control of a Rovio robot from Python programs. We have used PyRovio to implement Python-based actor-agents that participate in a live intermedia performance. We also use PyRovio as part of ongoing work in cognitive robotics to connect SNePS-based agent minds to their Rovio bodies in the world.
متن کاملThe first RSBI (ISA-TAB) workshop: "can a simple format work for complex studies?".
This article summarizes the motivation for, and the proceedings of, the first ISA-TAB workshop held December 6-8, 2007, at the EBI, Cambridge, UK. This exploratory workshop, organized by members of the Microarray Gene Expression Data (MGED) Society's Reporting Structure for Biological Investigations (RSBI) working group, brought together a group of developers of a range of collaborative systems...
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ژورنال
عنوان ژورنال: Journal of Open Source Software
سال: 2019
ISSN: 2475-9066
DOI: 10.21105/joss.01610